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There are several matches for 'exoribonuclease RNase R'.
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1257 matches
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organism
protein
1)
Escherichia coli K12
rnr -
Exoribonuclease
R
,
RNase
R
; 3'-5'
exoribonuclease
that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs (rRNAs, tRNAs and SsrA/tmRNA). In stationary phase, involved in the post- transcriptional regulation of ompA mRNA stability. Shortens RNA processively to di- and trinucleotides. In vitro, exhibits helicase activity, which is independent of its
RNase
activity.
RNases
2 and
R
(rnb and this entry) contribute to rRNA degradation during starvation, while
RNase
R
and PNPase (this entry and pnp) are the major contributors to quality control of rRNA duri [...]
[a.k.a. b4179, AAC77136.2, Ribonuclease R]
2)
Actinomyces naeslundii
OLO91948.1 - DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
[a.k.a. BKH10_00480, A0A2Z5QMQ1, OLO91948,
Exoribonuclease RNase R
]
3)
Janthinobacterium sp. Marseille
rnr -
Exoribonuclease
RNAse
R
; 3'-5'
exoribonuclease
that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs.
[a.k.a. mma_2115, ABR89682.1, Ribonuclease R,
Exoribonuclease RNAse R
,
exoribonuclease RNAse R
, ...]
4)
Pseudomonas aeruginosa
rnr -
Exoribonuclease
RNase
R
; 3'-5'
exoribonuclease
that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs.
[a.k.a. PA4937, AAG08322.1, Ribonuclease R,
exoribonuclease RNase R
,
Exoribonuclease RNase R
, ...]
5)
Sulfuricurvum kujiense
ADR33341.1 -
RNAse
R
; COGs: COG0557
Exoribonuclease
R
; InterPro IPR001900: IPR004476; KEGG: tdn:Suden_0543
exoribonuclease
II; PFAM: ribonuclease II; SPTR:
RNAse
R
; TIGRFAM: VacB and
RNase
II family 3'-5'
exoribonuclease
; PFAM: RNB domain; TIGRFAM: ribonuclease
R
; VacB and
RNase
II family 3'-5'
exoribonucleases
.
[a.k.a. Sulku_0675, Ribonuclease R, E4U137]
6)
Desulfobulbus propionicus
ADW18726.1 - COGs: COG0557
Exoribonuclease
R
; InterProIPR011129: IPR011805: IPR004476: IPR003029: IPR 000771: IPR001900: IPR013223; KEGG: dak:DaAHT2_2608 ribonuclease
R
; PFAM: ribonuclease II; Ribonuclease B OB region domain; RNA binding S1 domain protein; SMART: Cold shock protein; SPTR: 3'-5'
exoribonuclease
, VacB and
RNase
II:Ribonuclease
R
; TIGRFAM: ribonuclease
R
; VacB and
RNase
II family 3'-5'
exoribonuclease
; PFAM: Ribonuclease B OB domain; RNB domain; S1 RNA binding domain; TIGRFAM: ribonuclease
R
; VacB and
RNase
II family 3'-5'
exoribonucleases
.
[a.k.a. Despr_2590, Ribonuclease R, 3.1.13.1]
7)
Emticicia oligotrophica
AFK03627.1 - PFAM: RNB domain; Ribonuclease B OB domain; S1 RNA binding domain; TIGRFAM: ribonuclease
R
; VacB and
RNase
II family 3'-5'
exoribonucleases
; COGs: COG0557
Exoribonuclease
R
; InterProIPR013223:IPR001900:IPR003029:IPR011805:IPR 004476; KEGG: lby:Lbys_2458
RNase
R
; PFAM: Ribonuclease II/R; Ribonuclease B, OB region N-terminal; Ribosomal protein S1, RNA binding domain; SPTR:
RNAse
R
; TIGRFAM: Ribonuclease
R
, bacterial; Ribonuclease II/ribonuclease
R
, bacteria.
[a.k.a. Emtol_2491, Ribonuclease R, IPR016027]
8)
Cyanobacterium stanieri
AFZ47104.1 - PFAM: RNB domain; Ribonuclease B OB domain; S1 RNA binding domain; TIGRFAM: ribonuclease
R
; VacB and
RNase
II family 3'-5'
exoribonucleases
; COGs: COG0557
Exoribonuclease
R
; InterProIPR004476:IPR011129:IPR003029:IPR013223:IPR 001900; KEGG: cyc:PCC7424_3422 VacB and
RNase
II family 3'-5'
exoribonuclease
; PFAM: ribonuclease II; Ribonuclease B OB region domain; RNA binding S1 domain protein; SMART: Cold shock protein; SPTR: VacB and
RNase
II family 3'-5'
exoribonuclease
; TIGRFAM: VacB and
RNase
II family 3'-5'
exoribonuclease
; Belongs to the RNR ribonuclease family.
[a.k.a. Cyast_1137, AFZ47104, Ribonuclease R]
9)
Halothece sp. PCC7418
AFZ43157.1 - PFAM: RNB domain; Ribonuclease B OB domain; S1 RNA binding domain; TIGRFAM: ribonuclease
R
; VacB and
RNase
II family 3'-5'
exoribonucleases
; COGs: COG0557
Exoribonuclease
R
; InterProIPR004476:IPR013223:IPR001900:IPR003029:IPR 011129; KEGG: cyc:PCC7424_3422 VacB and
RNase
II family 3'-5'
exoribonuclease
; PFAM: ribonuclease II; Ribonuclease B OB region domain; RNA binding S1 domain protein; SMART: Cold shock protein; SPTR: VacB and
RNase
II family 3'-5'
exoribonuclease
; TIGRFAM: VacB and
RNase
II family 3'-5'
exoribonuclease
; Belongs to the RNR ribonuclease family.
[a.k.a. PCC7418_0948, WP_015225034.1, Ribonuclease R]
10)
Gloeocapsa sp. PCC7428
AFZ31412.1 - PFAM: Ribonuclease B OB domain; RNB domain; S1 RNA binding domain; TIGRFAM: ribonuclease
R
; VacB and
RNase
II family 3'-5'
exoribonucleases
; COGs: COG0557
Exoribonuclease
R
; InterProIPR004476:IPR013223:IPR001900:IPR003029:IPR 011129; KEGG: ava:Ava_0549 3'-5'
exoribonuclease
, VacB and
RNase
II; PFAM: Ribonuclease II/R; Ribonuclease B, N-terminal OB domain; Ribosomal protein S1, RNA binding domain; SPTR: 3'-5'
exoribonuclease
, VacB and
RNase
II; TIGRFAM: Ribonuclease II/ribonuclease
R
, bacteria; Belongs to the RNR ribonuclease family.
[a.k.a. Glo7428_2917, Ribonuclease R, IPR016027]
11)
Cyanobacterium aponinum
AFZ54438.1 - PFAM: RNB domain; Ribonuclease B OB domain; S1 RNA binding domain; TIGRFAM: ribonuclease
R
; VacB and
RNase
II family 3'-5'
exoribonucleases
; COGs: COG0557
Exoribonuclease
R
; InterProIPR013223:IPR001900:IPR003029:IPR011129:IPR 004476; KEGG: cyh:Cyan8802_1545 VacB and
RNase
II family 3'-5'
exoribonuclease
; PFAM: Ribonuclease II/R; Ribonuclease B, N-terminal OB domain; Ribosomal protein S1, RNA binding domain; SPTR: VacB and
RNase
II family 3'-5'
exoribonuclease
; TIGRFAM: Ribonuclease II/ribonuclease
R
, bacteria; Belongs to the RNR ribonuclease family.
[a.k.a. Cyan10605_2354, NC_019776.1, Ribonuclease R]
12)
Stanieria cyanosphaera
AFZ34405.1 - PFAM: Ribonuclease B OB domain; RNB domain; S1 RNA binding domain; TIGRFAM: ribonuclease
R
; VacB and
RNase
II family 3'-5'
exoribonucleases
; COGs: COG0557
Exoribonuclease
R
; InterProIPR004476:IPR011129:IPR013223:IPR001900:IPR 003029; KEGG: cyc:PCC7424_3422 VacB and
RNase
II family 3'-5'
exoribonuclease
; PFAM: Ribonuclease II/R; Ribonuclease B, N-terminal OB domain; Ribosomal protein S1, RNA binding domain; SPTR: VacB and
RNase
II family 3'-5'
exoribonuclease
; TIGRFAM: Ribonuclease II/ribonuclease
R
, bacteria; Belongs to the RNR ribonuclease family.
[a.k.a. Sta7437_0817, Ribonuclease R, IPR016027]
13)
Anabaena cylindrica
AFZ58367.1 - PFAM: Ribonuclease B OB domain; RNB domain; TIGRFAM: ribonuclease
R
; VacB and
RNase
II family 3'-5'
exoribonucleases
; COGs: COG0557
Exoribonuclease
R
; InterProIPR013223:IPR001900:IPR003029:IPR011129:IPR 022967:IPR004476; KEGG: naz:Aazo_1800 VacB and
RNase
II family 3'-5'
exoribonuclease
; PFAM: Ribonuclease II/R; Ribonuclease B, N-terminal OB domain; Ribosomal protein S1, RNA-binding domain; SMART: Ribonuclease II/R; Cold shock protein; RNA-binding domain, S1; SPTR: VacB and
RNase
II family 3'-5'
exoribonuclease
; TIGRFAM: Ribonuclease II/ribonuclease
R
, bacteria; Belongs to the RNR ribo [...]
[a.k.a. Anacy_2945, Ribonuclease R, WP_015214997.1]
14)
Crinalium epipsammum
AFZ13677.1 - VacB and
RNase
II family 3'-5'
exoribonuclease
; PFAM: Ribonuclease B OB domain; RNB domain; S1 RNA binding domain; TIGRFAM: ribonuclease
R
; VacB and
RNase
II family 3'-5'
exoribonucleases
; COGs: COG0557
Exoribonuclease
R
; InterProIPR013223:IPR001900:IPR003029:IPR004476:IPR 022967:IPR011129; KEGG: cyh:Cyan8802_1545 VacB and
RNase
II family 3'-5'
exoribonuclease
; PFAM: Ribonuclease II/R; Ribonuclease B, N-terminal OB domain; Ribosomal protein S1, RNA-binding domain; SMART: Ribonuclease II/R; Cold shock protein; RNA-binding domain, S1; SPTR: VacB and
RNase
II family 3'-5'
exoribonucleases
[...]
[a.k.a. Cri9333_2833, Ribonuclease R, IPR016027]
15)
Dickeya dadantii
rnr -
Exoribonuclease
R
,
RNase
R
; 3'-5'
exoribonuclease
that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs. Belongs to the RNR ribonuclease family.
RNase
R
subfamily.
[a.k.a. ADM99881.1, Dda3937_02609, Ribonuclease R]
16)
Escherichia coli IAI1
rnr -
Exoribonuclease
R
,
RNase
R
; 3'-5'
exoribonuclease
that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs. Belongs to the RNR ribonuclease family.
RNase
R
subfamily.
[a.k.a. ECIAI1_4412, CAR01154.1, Ribonuclease R]
17)
Escherichia coli IAI39
rnr -
Exoribonuclease
R
,
RNase
R
; 3'-5'
exoribonuclease
that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs. Belongs to the RNR ribonuclease family.
RNase
R
subfamily.
[a.k.a. CAR20742.1, ECIAI39_4644, Ribonuclease R]
18)
Escherichia coli UMN026
rnr -
Exoribonuclease
R
,
RNase
R
; 3'-5'
exoribonuclease
that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs. Belongs to the RNR ribonuclease family.
RNase
R
subfamily.
[a.k.a. ECUMN_4712, CAR15825.1, Ribonuclease R]
19)
Klebsiella quasipneumoniae
rnr -
Exoribonuclease
R
,
RNase
R
; 3'-5'
exoribonuclease
that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs. Belongs to the RNR ribonuclease family.
RNase
R
subfamily.
[a.k.a. SAZ17166.1, KQS06HV_230178, WP_004206447.1]
20)
Serratia symbiotica
rnr -
Exoribonuclease
R
,
RNase
R
; 3'-5'
exoribonuclease
that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs. Belongs to the RNR ribonuclease family.
RNase
R
subfamily.
[a.k.a. SYMBAF_180079, CDS56987.1, exoribonuclease R, RNase R]
1257 matches
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